Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901153.1_cds_XP_016451201.1_45581
CDS Infomation

[gene=LOC107775913] [db_xref=GeneID:107775913] [protein=CDT1-like protein a, chloroplastic] [protein_id=XP_016451201.1] [location=complement(join(192510..192594,192757..192847,192929..193130,193317..194027,194808..195039,195283..195626))] [gbkey=CDS]
Sequence

ATGGAGTCTAGTCAATCTTCTTTTTCACCCAAGAAACCACCCTTCCCTACCTCGAAAAAA
TCTGACCCGAATGCCACCGGGGCTCCATTTCAGGATCCATGGAGAACCAAGACCCCCGAG
AAGCCCCTCGATCATCCTCGCCGGACTCGGAACCGCAATGCCGCCTTCTCCTTAAAACAA
GTCCGGCAAGCCGCGCAGAAGCTCTGCAAGTCGGATCAAAACCACCCTACTCCCCAACCC
GACAGGTTATTGAGCTCCGGTAAATCCCATGGGGTCTCTTCTTTCTCGGGCTCTTCGAAA
GCCAAACCCAAGAAGCCTACTGACCCAGTAAAGCTACCAGAAAAGAGGTTTTCTTACGCT
CATTTAGCGCAGCTGAAGTTTATTTTACCTGAGGTTATTGAGATAAAAAAGATCCTTGTG
TTTGATGAACGTACAAACTGTATGAAGCCTGAACTTCATATTGCATTAAATGCTAATGCA
GTTGAAATTGACGAGAAGCGGAAATCTAGTAGCTCTGTTCAGCTGAGGAAAGTCTTCCGT
ACACGGCTTTTGAACTTTTTAAAATCCCATCCTCAGGGAGAAGACATTCCCGAGGAAGCA
CTACCTGGACCATTCGGTGATTCAAGGCAAGAAGTACTGACAAATTCGTCTGGATCTGCT
GGCGCACAGTTGATGAGTGAGACGACACCAATTGGTTCAGTGCCAGAGCAGCGAGCATCT
GCATCTCACCTGTCTCAATCTTTCAGAAGAAGATTTTCACACCGAGTATCAATTGGTGAA
GCGGAGGATGCCGAGCAACATCCACCAGTCACGGAATGCCAAATAGCTAAAAGTTCCAAT
AACAAAAGAACCTCAACAGCTTCTGATAAATGTCCTTCTAAAAAGCCTACAATGCAAACT
AGCACAGTTAAAAACTCATCGCCAGTGGTTGCTTTTGATACTTTACTGCTGACTCCTCTG
CCTGCCACTCCAATGAAGAATATAAAGGGCGATGATGAATATGCTTTATTAACTGCTGAA
GGAACTCAAGCAAGACTTACATCTACACCAGAAAAACTGACGACTTCTACCCCTATGCCT
CAATCTCCCAAGAGATGTTGTATGAGTCCTAATAGTGGTTCAACTGAATCACCAAGCAAG
CTAGTTAGGCGACCTCCTCGTAATAGGTCTTTGAACTTCAATACTCCTGTGAAGAGTTCA
AATGTTACTGATAAAGCGTGTGAGGGTGCAGGATTGCCAATAAATAATGATATCATCGAC
ATTCTTTCGGAGGATCTTCTGCAGTCGTTACAACAAAAAGAGAGGAAGGGGCTAGAGGAG
CAAGATCCAGCCTTATCCCAAGCGAAAAGACGCAAGCAGATGATTTCAAGCTTGCCTAAA
TTCTTTGACATGATATATTTCCTATTTCAATCAGGAAGACGCATGGTGATTACAAAAGAG
GAACTTATTCATAATGTAATTTCAAGCCATCTAGAGATTGCTGATAGAAGAGAAGTTGAA
GAGCAACTCAGGTTATTGCAAGAACTTGCTCCTGAATGGATTTACAAAAAGGTGGCAGCT
AGTGGGGATCTTCTCTTATGTGTTAACCAGATATCAAGTCCTAAAGAACTACACACAAGA
CTAGCTGAAGCGAAATTAGAGAAACAAGAAGATAGTTGTATATAA

Peptide Sequence

PEP ID

XP_016451201.1
PEP Infomation

PREDICTED: CDT1-like protein a, chloroplastic [Nicotiana tabacum]
Sequence

MESSQSSFSPKKPPFPTSKKSDPNATGAPFQDPWRTKTPEKPLDHPRRTRNRNAAFSLKQ
VRQAAQKLCKSDQNHPTPQPDRLLSSGKSHGVSSFSGSSKAKPKKPTDPVKLPEKRFSYA
HLAQLKFILPEVIEIKKILVFDERTNCMKPELHIALNANAVEIDEKRKSSSSVQLRKVFR
TRLLNFLKSHPQGEDIPEEALPGPFGDSRQEVLTNSSGSAGAQLMSETTPIGSVPEQRAS
ASHLSQSFRRRFSHRVSIGEAEDAEQHPPVTECQIAKSSNNKRTSTASDKCPSKKPTMQT
STVKNSSPVVAFDTLLLTPLPATPMKNIKGDDEYALLTAEGTQARLTSTPEKLTTSTPMP
QSPKRCCMSPNSGSTESPSKLVRRPPRNRSLNFNTPVKSSNVTDKACEGAGLPINNDIID
ILSEDLLQSLQQKERKGLEEQDPALSQAKRRKQMISSLPKFFDMIYFLFQSGRRMVITKE
ELIHNVISSHLEIADRREVEEQLRLLQELAPEWIYKKVAASGDLLLCVNQISSPKELHTR
LAEAKLEKQEDSCI

Transcript Sequence

Gene sequence data has not been registered.